HL_7OF2_023

3D structure

PDB id

7OF2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUAAAUAG

Length

9 nucleotides

Bulged bases

7OF2|1|A|U|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF2_023 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2802

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33350.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7OF2|1|A|C|2612
7OF2|1|A|U|2613
7OF2|1|A|U|2614
7OF2|1|A|A|2615
7OF2|1|A|A|2616
7OF2|1|A|A|2617
7OF2|1|A|U|2618
7OF2|1|A|A|2619
7OF2|1|A|G|2620

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

Putative GTP-binding protein 6

Chain L

39S ribosomal protein L14, mitochondrial