HL_7OF3_012
3D structure
- PDB id
- 7OF3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAACAGC
- Length
- 8 nucleotides
- Bulged bases
- 7OF3|1|A|G|2108, 7OF3|1|A|A|2109, 7OF3|1|A|C|2111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF3_012 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3019
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7OF3|1|A|G|2107
7OF3|1|A|G|2108
7OF3|1|A|A|2109
7OF3|1|A|A|2110
7OF3|1|A|C|2111
7OF3|1|A|A|2112
7OF3|1|A|G|2113
7OF3|1|A|C|2114
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 5-methylcytosine rRNA methyltransferase NSUN4
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
Coloring options: