HL_7OF5_009
3D structure
- PDB id
- 7OF5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCGACAAAC
- Length
- 9 nucleotides
- Bulged bases
- 7OF5|1|A|A|1991, 7OF5|1|A|A|1994
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF5_009 not in the Motif Atlas
- Geometric match to HL_5TBW_021
- Geometric discrepancy: 0.2661
- The information below is about HL_5TBW_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7OF5|1|A|G|1988
7OF5|1|A|C|1989
7OF5|1|A|G|1990
7OF5|1|A|A|1991
7OF5|1|A|C|1992
7OF5|1|A|A|1993
7OF5|1|A|A|1994
7OF5|1|A|A|1995
7OF5|1|A|C|1996
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: