HL_7OF6_024

3D structure

PDB id

7OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUAAAUAG

Length

9 nucleotides

Bulged bases

7OF6|1|A|U|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF6_024 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2261

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33350.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7OF6|1|A|C|2612
7OF6|1|A|U|2613
7OF6|1|A|U|2614
7OF6|1|A|A|2615
7OF6|1|A|A|2616
7OF6|1|A|A|2617
7OF6|1|A|U|2618
7OF6|1|A|A|2619
7OF6|1|A|G|2620

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

Putative GTP-binding protein 6

Chain L

39S ribosomal protein L14, mitochondrial