HL_7OF7_032

3D structure

PDB id

7OF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

U(OMU)(OMG)UUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF7_032 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.1213

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7OF7|1|A|U|3038
7OF7|1|A|OMU|3039
7OF7|1|A|OMG|3040
7OF7|1|A|U|3041
7OF7|1|A|U|3042
7OF7|1|A|C|3043
7OF7|1|A|A|3044

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain x

Mitochondrial ribosome-associated GTPase 2