HL_7OG4_063

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

(Y5P)(P5P)(P5P)(Y5P)(Y5P)(P5P)(P5P)(Y5P)(P5P)(P5P)

Length

10 nucleotides

Bulged bases

7OG4|1|r3|Y5P|17, 7OG4|1|r3|P5P|18, 7OG4|1|r3|P5P|19, 7OG4|1|r3|Y5P|20

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OG4_063 not in the Motif Atlas

Geometric match to HL_3TUP_001

Geometric discrepancy: 0.3313

The information below is about HL_3TUP_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_45175.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

5

Unit IDs

7OG4|1|r3|Y5P|13
7OG4|1|r3|P5P|14
7OG4|1|r3|P5P|15
7OG4|1|r3|Y5P|16
7OG4|1|r3|Y5P|17
7OG4|1|r3|P5P|18
7OG4|1|r3|P5P|19
7OG4|1|r3|Y5P|20
7OG4|1|r3|P5P|21
7OG4|1|r3|P5P|22

Current chains

Chain r3

P/E-tRNA

Nearby chains