HL_7OH3_055

3D structure

PDB id

7OH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUAAACGAUAAG

Length

12 nucleotides

Bulged bases

7OH3|1|1|A|2637

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OH3_055 not in the Motif Atlas

Homologous match to HL_5TBW_055

Geometric discrepancy: 0.599

The information below is about HL_5TBW_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.9

Basepair signature

cWW-tHH-cWW-tHS-F-F-tWW

Number of instances in this motif group

8

Unit IDs

7OH3|1|1|U|2633
7OH3|1|1|U|2634
7OH3|1|1|A|2635
7OH3|1|1|A|2636
7OH3|1|1|A|2637
7OH3|1|1|C|2638
7OH3|1|1|G|2639
7OH3|1|1|A|2640
7OH3|1|1|U|2641
7OH3|1|1|A|2642
7OH3|1|1|A|2643
7OH3|1|1|G|2645

Current chains

Chain 1

25S rRNA

Nearby chains

Chain w

Regulator of ribosome biosynthesis