HL_7OHQ_014
3D structure
- PDB id
- 7OHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 7OHQ|1|1|U|643, 7OHQ|1|1|A|645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHQ_014 not in the Motif Atlas
- Geometric match to HL_8C3A_054
- Geometric discrepancy: 0.2289
- The information below is about HL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7OHQ|1|1|U|640
7OHQ|1|1|C|641
7OHQ|1|1|U|642
7OHQ|1|1|U|643
7OHQ|1|1|G|644
7OHQ|1|1|A|645
7OHQ|1|1|A|646
7OHQ|1|1|A|647
7OHQ|1|1|C|648
7OHQ|1|1|A|649
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain e
- 60S ribosomal protein L32
- Chain m
- Nucleolar GTP-binding protein 2
- Chain s
- Nuclear GTP-binding protein NUG1
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