HL_7OHQ_057
3D structure
- PDB id
- 7OHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUCAGUGUGA
- Length
- 11 nucleotides
- Bulged bases
- 7OHQ|1|1|C|2726, 7OHQ|1|1|A|2727, 7OHQ|1|1|G|2730
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHQ_057 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3983
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7OHQ|1|1|U|2723
7OHQ|1|1|U|2724
7OHQ|1|1|U|2725
7OHQ|1|1|C|2726
7OHQ|1|1|A|2727
7OHQ|1|1|G|2728
7OHQ|1|1|U|2729
7OHQ|1|1|G|2730
7OHQ|1|1|U|2731
7OHQ|1|1|G|2732
7OHQ|1|1|A|2733
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
- Chain v
- Ribosome biogenesis protein RPF2
- Chain w
- Regulator of ribosome biosynthesis
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