HL_7OHR_008
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7OHR|1|1|G|283, 7OHR|1|1|A|284, 7OHR|1|1|A|285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHR_008 not in the Motif Atlas
- Homologous match to HL_8C3A_008
- Geometric discrepancy: 0.2368
- The information below is about HL_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7OHR|1|1|U|278
7OHR|1|1|U|279
7OHR|1|1|U|280
7OHR|1|1|G|281
7OHR|1|1|G|282
7OHR|1|1|G|283
7OHR|1|1|A|284
7OHR|1|1|A|285
7OHR|1|1|U|286
7OHR|1|1|G|287
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Ribosome biogenesis protein BRX1
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
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