HL_7OHR_039
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 7OHR|1|1|G|2371, 7OHR|1|1|A|2373
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHR_039 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.2194
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7OHR|1|1|G|2369
7OHR|1|1|G|2370
7OHR|1|1|G|2371
7OHR|1|1|A|2372
7OHR|1|1|A|2373
7OHR|1|1|C|2374
7OHR|1|1|G|2375
7OHR|1|1|G|2376
7OHR|1|1|G|2377
7OHR|1|1|C|2378
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain e
- 60S ribosomal protein L32
- Chain s
- Nuclear GTP-binding protein NUG1
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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