HL_7OHT_004
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAACUGAGAGUGAAAAAGUAC
- Length
- 21 nucleotides
- Bulged bases
- 7OHT|1|1|A|398, 7OHT|1|1|A|402
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHT|1|1|G|376
7OHT|1|1|A|377
7OHT|1|1|A|378
7OHT|1|1|C|379
7OHT|1|1|U|380
7OHT|1|1|G|388
7OHT|1|1|A|389
7OHT|1|1|G|390
7OHT|1|1|A|391
7OHT|1|1|G|392
7OHT|1|1|U|393
7OHT|1|1|G|394
7OHT|1|1|A|395
7OHT|1|1|A|396
7OHT|1|1|A|397
7OHT|1|1|A|398
7OHT|1|1|A|399
7OHT|1|1|G|400
7OHT|1|1|U|401
7OHT|1|1|A|402
7OHT|1|1|C|403
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: