HL_7OHT_020

3D structure

PDB id

7OHT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

AGAACAGAAAUCU

Length

13 nucleotides

Bulged bases

7OHT|1|1|A|2678, 7OHT|1|1|A|2679

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHT|1|1|A|2671
7OHT|1|1|G|2672
7OHT|1|1|A|2673
7OHT|1|1|A|2674
7OHT|1|1|C|2675
7OHT|1|1|A|2676
7OHT|1|1|G|2677
7OHT|1|1|A|2678
7OHT|1|1|A|2679
7OHT|1|1|A|2680
7OHT|1|1|U|2681
7OHT|1|1|C|2682
7OHT|1|1|U|2683

Current chains

Chain 1

25S rRNA

Nearby chains

Chain J

60S ribosomal protein L11-A