HL_7OHT_036
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUUGAUUUUCAGUGUGAAUACAAA
- Length
- 25 nucleotides
- Bulged bases
- 7OHT|1|1|C|2726, 7OHT|1|1|A|2727, 7OHT|1|1|G|2728, 7OHT|1|1|G|2730, 7OHT|1|1|U|2731
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHT|1|1|U|2716
7OHT|1|1|U|2717
7OHT|1|1|U|2718
7OHT|1|1|U|2719
7OHT|1|1|G|2720
7OHT|1|1|A|2721
7OHT|1|1|U|2722
7OHT|1|1|U|2723
7OHT|1|1|U|2724
7OHT|1|1|U|2725
7OHT|1|1|C|2726
7OHT|1|1|A|2727
7OHT|1|1|G|2728
7OHT|1|1|U|2729
7OHT|1|1|G|2730
7OHT|1|1|U|2731
7OHT|1|1|G|2732
7OHT|1|1|A|2733
7OHT|1|1|A|2734
7OHT|1|1|U|2735
7OHT|1|1|A|2736
7OHT|1|1|C|2737
7OHT|1|1|A|2738
7OHT|1|1|A|2739
7OHT|1|1|A|2740
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
- Chain v
- Ribosome biogenesis protein RPF2
- Chain w
- Regulator of ribosome biosynthesis
- Chain x
- Ribosome assembly protein 4
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