HL_7OHU_033

3D structure

PDB id

7OHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCUGAUCAGG

Length

10 nucleotides

Bulged bases

7OHU|1|1|U|3071

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OHU_033 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.337

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7OHU|1|1|U|3066
7OHU|1|1|C|3067
7OHU|1|1|U|3068
7OHU|1|1|G|3069
7OHU|1|1|A|3070
7OHU|1|1|U|3071
7OHU|1|1|C|3072
7OHU|1|1|A|3073
7OHU|1|1|G|3074
7OHU|1|1|G|3075

Current chains

Chain 1

25S rRNA

Nearby chains