HL_7OHV_022
3D structure
- PDB id
- 7OHV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 7OHV|1|1|A|1245
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHV_022 not in the Motif Atlas
- Homologous match to HL_8C3A_027
- Geometric discrepancy: 0.2873
- The information below is about HL_8C3A_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19210.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7OHV|1|1|C|1239
7OHV|1|1|A|1240
7OHV|1|1|U|1241
7OHV|1|1|G|1242
7OHV|1|1|G|1243
7OHV|1|1|A|1244
7OHV|1|1|A|1245
7OHV|1|1|G|1246
7OHV|1|1|U|1247
7OHV|1|1|C|1248
7OHV|1|1|G|1249
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain b
- Nucleolar GTP-binding protein 1
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