HL_7OHW_028

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAGGAACGGUU

Length

11 nucleotides

Bulged bases

7OHW|1|1|A|2373

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|1|A|2367
7OHW|1|1|A|2368
7OHW|1|1|G|2369
7OHW|1|1|G|2370
7OHW|1|1|A|2372
7OHW|1|1|A|2373
7OHW|1|1|C|2374
7OHW|1|1|G|2375
7OHW|1|1|G|2376
7OHW|1|1|U|2379
7OHW|1|1|U|2380

Current chains

Chain 1

25S rRNA

Nearby chains

Chain O

60S ribosomal protein L16-A

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L33-A