HL_7OI7_016

3D structure

PDB id

7OI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAACAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OI7_016 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3526

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

7OI7|1|A|A|649
7OI7|1|A|A|650
7OI7|1|A|A|651
7OI7|1|A|C|652
7OI7|1|A|A|653
7OI7|1|A|U|654

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial