HL_7OI8_013
3D structure
- PDB id
- 7OI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUAAAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 7OI8|1|A|A|511
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI8_013 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.3157
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OI8|1|A|C|505
7OI8|1|A|C|506
7OI8|1|A|U|507
7OI8|1|A|A|508
7OI8|1|A|A|509
7OI8|1|A|A|510
7OI8|1|A|A|511
7OI8|1|A|G|512
7OI8|1|A|C|513
7OI8|1|A|A|514
7OI8|1|A|G|515
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: