HL_7OI8_017
3D structure
- PDB id
- 7OI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI8_017 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.1277
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7OI8|1|A|G|679
7OI8|1|A|A|680
7OI8|1|A|U|681
7OI8|1|A|C|687
7OI8|1|A|A|688
7OI8|1|A|C|694
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
Coloring options: