HL_7OI9_021

3D structure

PDB id

7OI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGAGGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OI9_021 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1673

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

10

Unit IDs

7OI9|1|A|G|1020
7OI9|1|A|U|1021
7OI9|1|A|G|1022
7OI9|1|A|A|1026
7OI9|1|A|G|1027
7OI9|1|A|G|1028
7OI9|1|A|C|1029

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain r

39S ribosomal protein S18a, mitochondrial