HL_7OI9_023
3D structure
- PDB id
- 7OI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUGGGGCGA
- Length
- 9 nucleotides
- Bulged bases
- 7OI9|1|A|G|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI9_023 not in the Motif Atlas
- Homologous match to HL_5J7L_186
- Geometric discrepancy: 0.2524
- The information below is about HL_5J7L_186
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7OI9|1|A|U|1142
7OI9|1|A|U|1143
7OI9|1|A|G|1144
7OI9|1|A|G|1145
7OI9|1|A|G|1146
7OI9|1|A|G|1147
7OI9|1|A|C|1148
7OI9|1|A|G|1149
7OI9|1|A|A|1150
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: