HL_7OIB_008

3D structure

PDB id

7OIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

7OIB|1|A|A|321, 7OIB|1|A|A|324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIB_008 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.1911

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OIB|1|A|G|318
7OIB|1|A|C|319
7OIB|1|A|G|320
7OIB|1|A|A|321
7OIB|1|A|C|322
7OIB|1|A|A|323
7OIB|1|A|A|324
7OIB|1|A|A|325
7OIB|1|A|C|326

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial