HL_7OIC_022

3D structure

PDB id

7OIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

7OIC|1|A|A|851, 7OIC|1|A|U|852, 7OIC|1|A|C|853, 7OIC|1|A|A|857, 7OIC|1|A|U|861

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OIC|1|A|A|848
7OIC|1|A|G|849
7OIC|1|A|C|850
7OIC|1|A|A|851
7OIC|1|A|U|852
7OIC|1|A|C|853
7OIC|1|A|A|854
7OIC|1|A|C|855
7OIC|1|A|C|856
7OIC|1|A|A|857
7OIC|1|A|G|858
7OIC|1|A|U|859
7OIC|1|A|A|860
7OIC|1|A|U|861
7OIC|1|A|U|862

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial

Chain y

Transcription termination factor 4, mitochondrial