HL_7OIC_024
3D structure
- PDB id
- 7OIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 7OIC|1|A|A|1023, 7OIC|1|A|A|1024, 7OIC|1|A|G|1025
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OIC_024 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1335
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7OIC|1|A|G|1020
7OIC|1|A|U|1021
7OIC|1|A|G|1022
7OIC|1|A|A|1023
7OIC|1|A|A|1024
7OIC|1|A|G|1025
7OIC|1|A|A|1026
7OIC|1|A|G|1027
7OIC|1|A|G|1028
7OIC|1|A|C|1029
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: