HL_7OIC_026
3D structure
- PDB id
- 7OIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGGGGCGA
- Length
- 9 nucleotides
- Bulged bases
- 7OIC|1|A|G|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OIC_026 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.1407
- The information below is about HL_7A0S_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7OIC|1|A|U|1142
7OIC|1|A|U|1143
7OIC|1|A|G|1144
7OIC|1|A|G|1145
7OIC|1|A|G|1146
7OIC|1|A|G|1147
7OIC|1|A|C|1148
7OIC|1|A|G|1149
7OIC|1|A|A|1150
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain x
- 5-methylcytosine rRNA methyltransferase NSUN4
Coloring options: