3D structure

PDB id
7OIC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
7OIC|1|A|G|1161, 7OIC|1|A|A|1162, 7OIC|1|A|C|1169
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIC|1|A|G|1158
7OIC|1|A|C|1159
7OIC|1|A|A|1160
7OIC|1|A|G|1161
7OIC|1|A|A|1162
7OIC|1|A|A|1163
7OIC|1|A|C|1164
7OIC|1|A|C|1165
7OIC|1|A|C|1166
7OIC|1|A|A|1167
7OIC|1|A|A|1168
7OIC|1|A|C|1169
7OIC|1|A|C|1170

Current chains

Chain A
16S rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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