HL_7OIC_033

3D structure

PDB id

7OIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIC_033 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.1353

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7OIC|1|A|A|1411
7OIC|1|A|G|1412
7OIC|1|A|U|1413
7OIC|1|A|A|1414
7OIC|1|A|A|1415
7OIC|1|A|U|1416

Current chains

Chain A

16S rRNA

Nearby chains

Chain y

Transcription termination factor 4, mitochondrial