HL_7OID_034

3D structure

PDB id

7OID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OID_034 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2128

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7OID|1|A|U|1368
7OID|1|A|U|1369
7OID|1|A|G|1370
7OID|1|A|U|1371
7OID|1|A|U|1372
7OID|1|A|C|1373
7OID|1|A|A|1374

Current chains

Chain A

16S rRNA

Nearby chains