HL_7OIF_015

3D structure

PDB id

7OIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

7OIF|1|1|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIF_015 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.0971

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7OIF|1|1|C|487
7OIF|1|1|G|488
7OIF|1|1|G|489
7OIF|1|1|C|490
7OIF|1|1|G|491
7OIF|1|1|A|492
7OIF|1|1|G|493

Current chains

Chain 1

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L22