HL_7OIF_030

3D structure

PDB id

7OIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7OIF|1|1|A|1175, 7OIF|1|1|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIF_030 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3851

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7OIF|1|1|C|1172
7OIF|1|1|U|1173
7OIF|1|1|U|1174
7OIF|1|1|A|1175
7OIF|1|1|U|1176
7OIF|1|1|G|1177

Current chains

Chain 1

23S rRNA

Nearby chains