HL_7OIG_028

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

7OIG|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_028 not in the Motif Atlas

Geometric match to HL_5WWT_001

Geometric discrepancy: 0.3684

The information below is about HL_5WWT_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_45175.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

5

Unit IDs

7OIG|1|1|G|1063
7OIG|1|1|C|1064
7OIG|1|1|U|1065
7OIG|1|1|U|1066
7OIG|1|1|A|1067
7OIG|1|1|G|1068
7OIG|1|1|A|1069
7OIG|1|1|A|1070
7OIG|1|1|G|1071
7OIG|1|1|C|1072
7OIG|1|1|A|1073
7OIG|1|1|G|1074
7OIG|1|1|C|1075

Current chains

Chain 1

23S rRNA

Nearby chains