3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUAAAGAGUAACG
Length
13 nucleotides
Bulged bases
7OIG|1|1|A|2268, 7OIG|1|1|C|2275
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OIG_054 not in the Motif Atlas
Homologous match to HL_7RQB_054
Geometric discrepancy: 0.0799
The information below is about HL_7RQB_054
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_19870.6
Basepair signature
cWW-tSH-tHH-tWW-F-F-F
Number of instances in this motif group
7

Unit IDs

7OIG|1|1|C|2264
7OIG|1|1|U|2265
7OIG|1|1|A|2266
7OIG|1|1|A|2267
7OIG|1|1|A|2268
7OIG|1|1|G|2269
7OIG|1|1|A|2270
7OIG|1|1|G|2271
7OIG|1|1|U|2272
7OIG|1|1|A|2273
7OIG|1|1|A|2274
7OIG|1|1|C|2275
7OIG|1|1|G|2276

Current chains

Chain 1
23S rRNA

Nearby chains

Chain L
50S ribosomal protein L16
Chain V
50S ribosomal protein L27

Coloring options:


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