HL_7OIG_075

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

7OIG|1|2|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_075 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1153

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7OIG|1|2|G|259
7OIG|1|2|G|260
7OIG|1|2|U|261
7OIG|1|2|A|262
7OIG|1|2|A|263
7OIG|1|2|C|264
7OIG|1|2|G|265
7OIG|1|2|G|266
7OIG|1|2|C|267

Current chains

Chain 2

16S rRNA

Nearby chains

Chain u

30S ribosomal protein S17

Chain x

30S ribosomal protein S20