HL_7OIG_079

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_079 not in the Motif Atlas

Homologous match to HL_5J7L_010

Geometric discrepancy: 0.105

The information below is about HL_5J7L_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7OIG|1|2|C|379
7OIG|1|2|G|380
7OIG|1|2|C|381
7OIG|1|2|A|382
7OIG|1|2|A|383
7OIG|1|2|G|384

Current chains

Chain 2

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S16