3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAACCG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OII_007 not in the Motif Atlas
Homologous match to HL_5J7L_140
Geometric discrepancy: 0.0726
The information below is about HL_5J7L_140
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_62934.1
Basepair signature
cWW-tSH-F
Number of instances in this motif group
2

Unit IDs

7OII|1|1|C|225
7OII|1|1|A|226
7OII|1|1|A|227
7OII|1|1|C|228
7OII|1|1|C|229
7OII|1|1|G|230

Current chains

Chain 1
23S rRNA

Nearby chains

Chain K
50S ribosomal protein L15

Coloring options:


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