HL_7OII_060

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OII_060 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1445

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OII|1|1|A|2471
7OII|1|1|G|2472
7OII|1|1|U|2473
7OII|1|1|U|2474
7OII|1|1|C|2475
7OII|1|1|A|2476
7OII|1|1|U|2477
7OII|1|1|A|2478
7OII|1|1|U|2479

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain e

50S ribosomal protein L36