HL_7OII_106

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OII_106 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3764

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7OII|1|z|C|48
7OII|1|z|G|49
7OII|1|z|C|50
7OII|1|z|A|51
7OII|1|z|A|52
7OII|1|z|G|53

Current chains

Chain z

tRNA-Leu

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain q

30S ribosomal protein S13

Chain w

30S ribosomal protein S19