HL_7OIZ_022

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

7OIZ|1|A|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIZ_022 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3322

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

11

Unit IDs

7OIZ|1|A|C|1027
7OIZ|1|A|C|1028
7OIZ|1|A|U|1029
7OIZ|1|A|U|1030
7OIZ|1|A|C|1031
7OIZ|1|A|G|1032
7OIZ|1|A|G|1033
7OIZ|1|A|G|1034

Current chains

Chain A

16S rRNA

Nearby chains