HL_7OIZ_050

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

7OIZ|1|a|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIZ_050 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.2018

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

7OIZ|1|a|C|544
7OIZ|1|a|U|545
7OIZ|1|a|U|546
7OIZ|1|a|A|547
7OIZ|1|a|G|548
7OIZ|1|a|G|549

Current chains

Chain a

23S rRNA

Nearby chains

Chain q

50S ribosomal protein L21