HL_7OJ0_022

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

7OJ0|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OJ0_022 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3062

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7OJ0|1|A|C|1027
7OJ0|1|A|C|1028
7OJ0|1|A|U|1029
7OJ0|1|A|U|1030
7OJ0|1|A|C|1031
7OJ0|1|A|G|1032
7OJ0|1|A|G|1033
7OJ0|1|A|G|1034

Current chains

Chain A

16S rRNA

Nearby chains