3D structure

PDB id
7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CAGG
Length
4 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OJ0_072 not in the Motif Atlas
Homologous match to HL_7A0S_039
Geometric discrepancy: 0.1116
The information below is about HL_7A0S_039
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_48778.2
Basepair signature
cWW-F
Number of instances in this motif group
46

Unit IDs

7OJ0|1|a|C|1565
7OJ0|1|a|A|1566
7OJ0|1|a|G|1567
7OJ0|1|a|G|1568

Current chains

Chain a
23S rRNA

Nearby chains

Chain c
50S ribosomal protein L2

Coloring options:


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