HL_7OLC_019

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAUUC

Length

6 nucleotides

Bulged bases

7OLC|1|1|A|747

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OLC_019 not in the Motif Atlas

Homologous match to HL_5TBW_018

Geometric discrepancy: 0.1414

The information below is about HL_5TBW_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7OLC|1|1|G|745
7OLC|1|1|U|746
7OLC|1|1|A|747
7OLC|1|1|U|748
7OLC|1|1|U|749
7OLC|1|1|C|750

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13