HL_7OLC_058
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_058 not in the Motif Atlas
- Homologous match to HL_5TBW_058
- Geometric discrepancy: 0.1289
- The information below is about HL_5TBW_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7OLC|1|1|U|2683
7OLC|1|1|U|2684
7OLC|1|1|C|2685
7OLC|1|1|A|2686
7OLC|1|1|G|2687
7OLC|1|1|U|2688
7OLC|1|1|G|2689
7OLC|1|1|U|2690
7OLC|1|1|G|2691
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LQ
- Ribosomal protein L18-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Lo
- 60S ribosomal protein L44-like protein
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