HL_7OLC_081
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 7OLC|1|2|C|399, 7OLC|1|2|G|400
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_081 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1196
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OLC|1|2|C|390
7OLC|1|2|C|391
7OLC|1|2|U|392
7OLC|1|2|G|393
7OLC|1|2|A|394
7OLC|1|2|G|395
7OLC|1|2|A|396
7OLC|1|2|A|397
7OLC|1|2|A|398
7OLC|1|2|C|399
7OLC|1|2|G|400
7OLC|1|2|G|401
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4
- Chain SG
- 40S ribosomal protein S6
- Chain SI
- 40S ribosomal protein S8
- Chain SY
- 40S ribosomal protein S24
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