HL_7OLC_118
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACUGUGUAACAACUC
- Length
- 16 nucleotides
- Bulged bases
- 7OLC|1|1|A|1246
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_118 not in the Motif Atlas
- Geometric match to HL_5TBW_227
- Geometric discrepancy: 0.3043
- The information below is about HL_5TBW_227
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02373.2
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7OLC|1|1|G|1245
7OLC|1|1|A|1246
7OLC|1|1|C|1247
7OLC|1|1|U|1248
7OLC|1|1|G|1249
7OLC|1|1|U|1250
7OLC|1|1|G|1251
7OLC|1|1|U|1252
7OLC|1|1|A|1253
7OLC|1|1|A|1254
7OLC|1|1|C|1255
7OLC|1|1|A|1256
7OLC|1|1|A|1257
7OLC|1|1|C|1258
7OLC|1|1|U|1259
7OLC|1|1|C|1260
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L12-like protein
Coloring options: