HL_7OLC_126
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUAAAUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_126 not in the Motif Atlas
- Geometric match to HL_2IL9_007
- Geometric discrepancy: 0.234
- The information below is about HL_2IL9_007
- Detailed Annotation
- GNRA with extra near cWW
- Broad Annotation
- GNRA with extra near cWW
- Motif group
- HL_82182.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
7OLC|1|2|G|1080
7OLC|1|2|A|1081
7OLC|1|2|U|1082
7OLC|1|2|A|1083
7OLC|1|2|A|1084
7OLC|1|2|A|1085
7OLC|1|2|U|1086
7OLC|1|2|C|1087
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2-like protein
- Chain SV
- 40S ribosomal protein S21-like protein
- Chain SW
- 40S ribosomal protein S22-like protein
- Chain Sa
- 40S ribosomal protein S26
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