HL_7OLD_015
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 7OLD|1|1|C|636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_015 not in the Motif Atlas
- Homologous match to HL_8C3A_014
- Geometric discrepancy: 0.1039
- The information below is about HL_8C3A_014
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7OLD|1|1|U|628
7OLD|1|1|C|629
7OLD|1|1|U|630
7OLD|1|1|U|631
7OLD|1|1|G|632
7OLD|1|1|A|633
7OLD|1|1|A|634
7OLD|1|1|A|635
7OLD|1|1|C|636
7OLD|1|1|A|637
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Le
- 60S ribosomal protein L32-like protein
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