HL_7OLD_025
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAACUG
- Length
- 8 nucleotides
- Bulged bases
- 7OLD|1|1|C|1064
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_025 not in the Motif Atlas
- Homologous match to HL_8C3A_024
- Geometric discrepancy: 0.149
- The information below is about HL_8C3A_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7OLD|1|1|C|1059
7OLD|1|1|U|1060
7OLD|1|1|U|1061
7OLD|1|1|A|1062
7OLD|1|1|A|1063
7OLD|1|1|C|1064
7OLD|1|1|U|1065
7OLD|1|1|G|1066
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein l5-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
- Chain Lb
- 60S ribosomal protein L29
Coloring options: