HL_7OLD_060
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAAUUUG
- Length
- 9 nucleotides
- Bulged bases
- 7OLD|1|1|G|2736
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_060 not in the Motif Atlas
- Homologous match to HL_8C3A_061
- Geometric discrepancy: 0.1474
- The information below is about HL_8C3A_061
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
7OLD|1|1|C|2735
7OLD|1|1|G|2736
7OLD|1|1|A|2737
7OLD|1|1|A|2738
7OLD|1|1|A|2739
7OLD|1|1|U|2740
7OLD|1|1|U|2741
7OLD|1|1|U|2742
7OLD|1|1|G|2743
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Li
- 60S ribosomal protein L36
- Chain Lo
- 60S ribosomal protein L44-like protein
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